IL_7P7R_074

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUAAG*UGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_074 not in the Motif Atlas

Homologous match to IL_7RQB_074

Geometric discrepancy: 0.1447

The information below is about IL_7RQB_074

Detailed Annotation

UAA/GAN with extra stack

Broad Annotation

No text annotation

Motif group

IL_90318.1

Basepair signature

cWW-tSH-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

7P7R|1|A|U|1864
7P7R|1|A|U|1865
7P7R|1|A|A|1866
7P7R|1|A|A|1867
7P7R|1|A|G|1868
*
7P7R|1|A|U|1900
7P7R|1|A|G|1901
7P7R|1|A|A|1902
7P7R|1|A|A|1903
7P7R|1|A|G|1904

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

ARE-ABC-F family resistance factor PoxtA

Chain G

50S ribosomal protein L2