IL_7P7R_078
3D structure
- PDB id
- 7P7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGAAAUUCCUUG*CCCG
- Length
- 16 nucleotides
- Bulged bases
- 7P7R|1|A|A|1951, 7P7R|1|A|U|1957, 7P7R|1|A|C|1976
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7R_078 not in the Motif Atlas
- Geometric match to IL_4WF9_077
- Geometric discrepancy: 0.0975
- The information below is about IL_4WF9_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84014.2
- Basepair signature
- cWW-L-tHH-cHW-cWW-L-L-tSW-L
- Number of instances in this motif group
- 9
Unit IDs
7P7R|1|A|C|1947
7P7R|1|A|G|1948
7P7R|1|A|A|1949
7P7R|1|A|A|1950
7P7R|1|A|A|1951
7P7R|1|A|U|1952
7P7R|1|A|U|1953
7P7R|1|A|C|1954
7P7R|1|A|C|1955
7P7R|1|A|U|1956
7P7R|1|A|U|1957
7P7R|1|A|G|1958
*
7P7R|1|A|C|1974
7P7R|1|A|C|1975
7P7R|1|A|C|1976
7P7R|1|A|G|1977
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: