IL_7P7R_132

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GCAAU*AC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_132 not in the Motif Atlas

Geometric match to IL_5J7L_018

Geometric discrepancy: 0.089

The information below is about IL_5J7L_018

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

7P7R|1|a|G|397
7P7R|1|a|C|398
7P7R|1|a|A|399
7P7R|1|a|A|400
7P7R|1|a|U|401
*
7P7R|1|a|A|415
7P7R|1|a|C|416

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S16