3D structure

PDB id
7P7R (explore in PDB, NAKB, or RNA 3D Hub)
Description
PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AAGAG*UGGU
Length
9 nucleotides
Bulged bases
7P7R|1|a|A|691
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7P7R_147 not in the Motif Atlas
Homologous match to IL_5J7L_033
Geometric discrepancy: 0.1242
The information below is about IL_5J7L_033
Detailed Annotation
Tandem non-canonical cWW pairs
Broad Annotation
No text annotation
Motif group
IL_85033.2
Basepair signature
cWW-cWW-cWW-cWW
Number of instances in this motif group
35

Unit IDs

7P7R|1|a|A|688
7P7R|1|a|A|689
7P7R|1|a|G|690
7P7R|1|a|A|691
7P7R|1|a|G|692
*
7P7R|1|a|U|766
7P7R|1|a|G|767
7P7R|1|a|G|768
7P7R|1|a|U|769

Current chains

Chain a
16S rRNA

Nearby chains

Chain g
30S ribosomal protein S6
Chain p
30S ribosomal protein S15
Chain s
30S ribosomal protein S18

Coloring options:


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