IL_7P7R_165

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUG*CACUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_165 not in the Motif Atlas

Homologous match to IL_6CZR_158

Geometric discrepancy: 0.2443

The information below is about IL_6CZR_158

Detailed Annotation

Minor groove platform

Broad Annotation

Minor groove platform

Motif group

IL_40144.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

7P7R|1|a|G|1151
7P7R|1|a|U|1152
7P7R|1|a|U|1153
7P7R|1|a|G|1154
*
7P7R|1|a|C|1171
7P7R|1|a|A|1172
7P7R|1|a|C|1173
7P7R|1|a|U|1174
7P7R|1|a|C|1175

Current chains

Chain a

16S rRNA

Nearby chains

Chain j

30S ribosomal protein S9

Chain k

30S ribosomal protein S10