IL_7P7R_170

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAG*CAUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_170 not in the Motif Atlas

Geometric match to IL_4V88_461

Geometric discrepancy: 0.2498

The information below is about IL_4V88_461

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_36174.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

15

Unit IDs

7P7R|1|a|C|1285
7P7R|1|a|U|1286
7P7R|1|a|A|1287
7P7R|1|a|G|1288
*
7P7R|1|a|C|1299
7P7R|1|a|A|1300
7P7R|1|a|U|1301
7P7R|1|a|G|1302

Current chains

Chain a

16S rRNA

Nearby chains

Chain t

30S ribosomal protein S19