IL_7P7R_172

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7P7R|1|a|C|1426, 7P7R|1|a|A|1530

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_172 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.0873

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7P7R|1|a|C|1425
7P7R|1|a|C|1426
7P7R|1|a|G|1427
*
7P7R|1|a|C|1528
7P7R|1|a|A|1529
7P7R|1|a|A|1530
7P7R|1|a|G|1531

Current chains

Chain a

16S rRNA

Nearby chains

Chain D

Transfer RNA; tRNA

Chain b

mRNA

Chain f

30S ribosomal protein S5