IL_7P7U_009

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AC*GGAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7U_009 not in the Motif Atlas

Geometric match to IL_4LFB_025

Geometric discrepancy: 0.2032

The information below is about IL_4LFB_025

Detailed Annotation

Major groove minor groove platform; mini C-loop

Broad Annotation

No text annotation

Motif group

IL_73108.3

Basepair signature

cWW-cWS-cSH-cWW

Number of instances in this motif group

25

Unit IDs

7P7U|1|A|A|304
7P7U|1|A|C|305
*
7P7U|1|A|G|402
7P7U|1|A|G|403
7P7U|1|A|A|404
7P7U|1|A|U|405

Current chains

Chain A

23S rRNA

Nearby chains