IL_7P7U_024

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7U_024 not in the Motif Atlas

Homologous match to IL_7RQB_021

Geometric discrepancy: 0.1113

The information below is about IL_7RQB_021

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_56467.8

Basepair signature

cWW-tSH-tSH-tHS-cWW

Number of instances in this motif group

29

Unit IDs

7P7U|1|A|U|742
7P7U|1|A|G|743
7P7U|1|A|A|744
7P7U|1|A|A|745
7P7U|1|A|G|746
*
7P7U|1|A|U|763
7P7U|1|A|G|764
7P7U|1|A|G|765
7P7U|1|A|A|766
7P7U|1|A|G|767

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L2