IL_7P7U_070
3D structure
- PDB id
- 7P7U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome with P-tRNA, state IV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGCAAAA*UGAAGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 7P7U|1|A|A|1814, 7P7U|1|A|A|1829, 7P7U|1|A|U|1833
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7U_070 not in the Motif Atlas
- Homologous match to IL_7A0S_065
- Geometric discrepancy: 0.1099
- The information below is about IL_7A0S_065
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.6
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7P7U|1|A|U|1811
7P7U|1|A|G|1812
7P7U|1|A|C|1813
7P7U|1|A|A|1814
7P7U|1|A|A|1815
7P7U|1|A|A|1816
7P7U|1|A|A|1817
*
7P7U|1|A|U|1826
7P7U|1|A|G|1827
7P7U|1|A|A|1828
7P7U|1|A|A|1829
7P7U|1|A|G|1830
7P7U|1|A|U|1831
7P7U|1|A|A|1832
7P7U|1|A|U|1833
7P7U|1|A|A|1834
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: