IL_7P7U_082

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

7P7U|1|A|A|2452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7U_082 not in the Motif Atlas

Homologous match to IL_7RQB_081

Geometric discrepancy: 0.0997

The information below is about IL_7RQB_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

33

Unit IDs

7P7U|1|A|G|2083
7P7U|1|A|A|2084
*
7P7U|1|A|U|2451
7P7U|1|A|A|2452
7P7U|1|A|C|2453
7P7U|1|A|C|2454

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Transfer RNA; tRNA

Chain G

50S ribosomal protein L2