IL_7P7U_106

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

7P7U|1|A|A|2889

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7U_106 not in the Motif Atlas

Homologous match to IL_7RQB_108

Geometric discrepancy: 0.1222

The information below is about IL_7RQB_108

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_61258.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

40

Unit IDs

7P7U|1|A|G|2848
7P7U|1|A|G|2849
*
7P7U|1|A|U|2888
7P7U|1|A|A|2889
7P7U|1|A|C|2890

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L17