IL_7PHC_012

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

GGACUU*AUACC

Length

11 nucleotides

Bulged bases

7PHC|1|3|A|315

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_012 not in the Motif Atlas

Geometric match to IL_4V88_422

Geometric discrepancy: 0.3462

The information below is about IL_4V88_422

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05145.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

13

Unit IDs

7PHC|1|3|G|313
7PHC|1|3|G|314
7PHC|1|3|A|315
7PHC|1|3|C|316
7PHC|1|3|U|317
7PHC|1|3|U|318
*
7PHC|1|3|A|390
7PHC|1|3|U|391
7PHC|1|3|A|392
7PHC|1|3|C|393
7PHC|1|3|C|394

Current chains

Chain 3

23S ribosomal RNA

Nearby chains