IL_7PHC_043
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- CGUU*AAGUG
- Length
- 9 nucleotides
- Bulged bases
- 7PHC|1|3|G|1278
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PHC_043 not in the Motif Atlas
- Geometric match to IL_4EYA_008
- Geometric discrepancy: 0.3266
- The information below is about IL_4EYA_008
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_37443.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 11
Unit IDs
7PHC|1|3|C|1227
7PHC|1|3|G|1228
7PHC|1|3|U|1229
7PHC|1|3|U|1230
*
7PHC|1|3|A|1276
7PHC|1|3|A|1277
7PHC|1|3|G|1278
7PHC|1|3|U|1279
7PHC|1|3|G|1280
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L4
- Chain k
- 50S ribosomal protein L15
- Chain p
- 50S ribosomal protein L20
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