IL_7PHC_067

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

GAAG*UAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_067 not in the Motif Atlas

Geometric match to IL_4KZD_002

Geometric discrepancy: 0.3049

The information below is about IL_4KZD_002

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.3

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

47

Unit IDs

7PHC|1|3|G|1863
7PHC|1|3|A|1864
7PHC|1|3|A|1865
7PHC|1|3|G|1866
*
7PHC|1|3|U|1890
7PHC|1|3|A|1891
7PHC|1|3|A|1892
7PHC|1|3|C|1893

Current chains

Chain 3

23S ribosomal RNA

Nearby chains