IL_7PHC_079

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

AUC*GGUU

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_079 not in the Motif Atlas

Geometric match to IL_4WSM_372

Geometric discrepancy: 0.3492

The information below is about IL_4WSM_372

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_16315.2

Basepair signature

cWW-cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

7PHC|1|3|A|2112
7PHC|1|3|U|2113
7PHC|1|3|C|2114
*
7PHC|1|3|G|2190
7PHC|1|3|G|2191
7PHC|1|3|U|2192
7PHC|1|3|U|2193

Current chains

Chain 3

23S ribosomal RNA

Nearby chains