IL_7PHC_095

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

7PHC|1|3|A|2580, 7PHC|1|3|C|2581

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_095 not in the Motif Atlas

Geometric match to IL_4WF9_096

Geometric discrepancy: 0.2454

The information below is about IL_4WF9_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_44609.3

Basepair signature

cWW-cWW

Number of instances in this motif group

26

Unit IDs

7PHC|1|3|C|2520
7PHC|1|3|A|2521
*
7PHC|1|3|U|2579
7PHC|1|3|A|2580
7PHC|1|3|C|2581
7PHC|1|3|G|2582

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain b

50S ribosomal protein L3

Chain i

50S ribosomal protein L13