IL_7PHC_123
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 7PHC|1|5|U|159
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PHC_123 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.2696
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PHC|1|5|G|133
7PHC|1|5|G|134
7PHC|1|5|A|135
7PHC|1|5|U|136
7PHC|1|5|A|137
7PHC|1|5|A|138
7PHC|1|5|C|139
*
7PHC|1|5|G|154
7PHC|1|5|C|155
7PHC|1|5|U|156
7PHC|1|5|A|157
7PHC|1|5|A|158
7PHC|1|5|U|159
7PHC|1|5|A|160
7PHC|1|5|C|161
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain S
- 30S ribosomal protein S20
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