IL_7PHC_158

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

GG*UCAUC

Length

7 nucleotides

Bulged bases

7PHC|1|5|C|1175, 7PHC|1|5|A|1176

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_158 not in the Motif Atlas

Homologous match to IL_4LFB_045

Geometric discrepancy: 0.1674

The information below is about IL_4LFB_045

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_24264.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7PHC|1|5|G|1048
7PHC|1|5|G|1049
*
7PHC|1|5|U|1174
7PHC|1|5|C|1175
7PHC|1|5|A|1176
7PHC|1|5|U|1177
7PHC|1|5|C|1178

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain B

30S ribosomal protein S3

Chain I

30S ribosomal protein S10

Chain M

30S ribosomal protein S14 type Z