IL_7PHC_219

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

GUG*CAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_219 not in the Motif Atlas

Geometric match to IL_4M4O_001

Geometric discrepancy: 0.2686

The information below is about IL_4M4O_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

7PHC|1|5|G|768
7PHC|1|5|U|769
7PHC|1|5|G|770
*
7PHC|1|5|C|803
7PHC|1|5|A|804
7PHC|1|5|C|805

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain 3

Large subunit ribosomal RNA; LSU rRNA

Chain N

30S ribosomal protein S15

Chain a

50S ribosomal protein L2