IL_7PIA_007
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- GUGAAGUG*CUCAGUAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_007 not in the Motif Atlas
- Homologous match to IL_4WF9_008
- Geometric discrepancy: 0.2754
- The information below is about IL_4WF9_008
- Detailed Annotation
- 9x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_93502.1
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7PIA|1|3|G|191
7PIA|1|3|U|192
7PIA|1|3|G|193
7PIA|1|3|A|194
7PIA|1|3|A|195
7PIA|1|3|G|196
7PIA|1|3|U|197
7PIA|1|3|G|198
*
7PIA|1|3|C|205
7PIA|1|3|U|206
7PIA|1|3|C|207
7PIA|1|3|A|208
7PIA|1|3|G|209
7PIA|1|3|U|210
7PIA|1|3|A|211
7PIA|1|3|G|212
7PIA|1|3|C|213
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain 1
- 50S ribosomal protein L35
- Chain 8
- Transfer RNA; tRNA
- Chain k
- 50S ribosomal protein L15
- Chain v
- 50S ribosomal protein L28
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