IL_7PIA_044
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- ACCAG*CUU
- Length
- 8 nucleotides
- Bulged bases
- 7PIA|1|3|U|1360
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_044 not in the Motif Atlas
- Geometric match to IL_4JRC_003
- Geometric discrepancy: 0.3799
- The information below is about IL_4JRC_003
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
7PIA|1|3|A|1347
7PIA|1|3|C|1348
7PIA|1|3|C|1349
7PIA|1|3|A|1350
7PIA|1|3|G|1351
*
7PIA|1|3|C|1359
7PIA|1|3|U|1360
7PIA|1|3|U|1361
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain r
- 50S ribosomal protein L22
- Chain s
- 50S ribosomal protein L23
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