IL_7PIA_059

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

ACUCUG*CUGU

Length

10 nucleotides

Bulged bases

7PIA|1|3|C|1706, 7PIA|1|3|U|1707, 7PIA|1|3|G|1999

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIA_059 not in the Motif Atlas

Homologous match to IL_8VTW_066

Geometric discrepancy: 0.4889

The information below is about IL_8VTW_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06455.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

7

Unit IDs

7PIA|1|3|A|1703
7PIA|1|3|C|1704
7PIA|1|3|U|1705
7PIA|1|3|C|1706
7PIA|1|3|U|1707
7PIA|1|3|G|1708
*
7PIA|1|3|C|1997
7PIA|1|3|U|1998
7PIA|1|3|G|1999
7PIA|1|3|U|2000

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L3

Chain j

50S ribosomal protein L14