IL_7PIA_232

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

7PIA|1|5|G|247

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIA_232 not in the Motif Atlas

Homologous match to IL_5J7L_015

Geometric discrepancy: 0.5574

The information below is about IL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

7PIA|1|5|U|245
7PIA|1|5|A|246
7PIA|1|5|G|247
7PIA|1|5|U|248
*
7PIA|1|5|A|270
7PIA|1|5|G|271

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain P

30S ribosomal protein S17