IL_7PIB_007
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGAAGUG*CUCAGUAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_007 not in the Motif Atlas
- Geometric match to IL_7A0S_006
- Geometric discrepancy: 0.1663
- The information below is about IL_7A0S_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.4
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
7PIB|1|3|U|192
7PIB|1|3|G|193
7PIB|1|3|A|194
7PIB|1|3|A|195
7PIB|1|3|G|196
7PIB|1|3|U|197
7PIB|1|3|G|198
*
7PIB|1|3|C|205
7PIB|1|3|U|206
7PIB|1|3|C|207
7PIB|1|3|A|208
7PIB|1|3|G|209
7PIB|1|3|U|210
7PIB|1|3|A|211
7PIB|1|3|G|212
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain 8
- Transfer RNA; tRNA
- Chain k
- 50S ribosomal protein L15
- Chain v
- 50S ribosomal protein L28
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