IL_7PIB_013

3D structure

PDB id

7PIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UAG*UGAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIB_013 not in the Motif Atlas

Geometric match to IL_5J7L_254

Geometric discrepancy: 0.2432

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

7PIB|1|3|U|327
7PIB|1|3|A|328
7PIB|1|3|G|329
*
7PIB|1|3|U|377
7PIB|1|3|G|378
7PIB|1|3|A|379
7PIB|1|3|A|380
7PIB|1|3|A|381

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain t

50S ribosomal protein L24