IL_7PIB_058

3D structure

PDB id

7PIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

ACUCUG*CUGU

Length

10 nucleotides

Bulged bases

7PIB|1|3|G|1999

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIB_058 not in the Motif Atlas

Homologous match to IL_8VTW_066

Geometric discrepancy: 0.4253

The information below is about IL_8VTW_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_06455.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

7

Unit IDs

7PIB|1|3|A|1703
7PIB|1|3|C|1704
7PIB|1|3|U|1705
7PIB|1|3|C|1706
7PIB|1|3|U|1707
7PIB|1|3|G|1708
*
7PIB|1|3|C|1997
7PIB|1|3|U|1998
7PIB|1|3|G|1999
7PIB|1|3|U|2000

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain b

50S ribosomal protein L3

Chain j

50S ribosomal protein L14