IL_7PIB_106

3D structure

PDB id

7PIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CGC*GUGG

Length

7 nucleotides

Bulged bases

7PIB|1|4|G|64

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIB_106 not in the Motif Atlas

Geometric match to IL_4WF9_044

Geometric discrepancy: 0.2451

The information below is about IL_4WF9_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_42997.6

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

26

Unit IDs

7PIB|1|4|C|15
7PIB|1|4|G|16
7PIB|1|4|C|17
*
7PIB|1|4|G|62
7PIB|1|4|U|63
7PIB|1|4|G|64
7PIB|1|4|G|65

Current chains

Chain 4

5S ribosomal RNA

Nearby chains

Chain 3

Large subunit ribosomal RNA; LSU rRNA