IL_7PIB_192
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGAUUAA*UUAUCC
- Length
- 13 nucleotides
- Bulged bases
- 7PIB|1|5|U|32
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_192 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.3121
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
7PIB|1|5|G|28
7PIB|1|5|G|29
7PIB|1|5|A|30
7PIB|1|5|U|31
7PIB|1|5|U|32
7PIB|1|5|A|33
7PIB|1|5|A|34
*
7PIB|1|5|U|549
7PIB|1|5|U|550
7PIB|1|5|A|551
7PIB|1|5|U|552
7PIB|1|5|C|553
7PIB|1|5|C|554
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
- Chain K
- 30S ribosomal protein S12
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