IL_7PIB_199
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGAAU*GGAAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_199 not in the Motif Atlas
- Homologous match to IL_5J7L_361
- Geometric discrepancy: 0.201
- The information below is about IL_5J7L_361
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7PIB|1|5|G|670
7PIB|1|5|G|671
7PIB|1|5|A|672
7PIB|1|5|A|673
7PIB|1|5|U|674
*
7PIB|1|5|G|710
7PIB|1|5|G|711
7PIB|1|5|A|712
7PIB|1|5|A|713
7PIB|1|5|C|714
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S6
- Chain J
- 30S ribosomal protein S11
- Chain Q
- 30S ribosomal protein S18
- Chain T
- 30S ribosomal protein S21
- Chain a
- 50S ribosomal protein L2
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