IL_7PIR_118
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CUUAUA*UAUUUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_118 not in the Motif Atlas
- Geometric match to IL_9AXU_008
- Geometric discrepancy: 0.3752
- The information below is about IL_9AXU_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_95349.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PIR|1|5|C|122
7PIR|1|5|U|123
7PIR|1|5|U|124
7PIR|1|5|A|125
7PIR|1|5|U|126
7PIR|1|5|A|127
*
7PIR|1|5|U|218
7PIR|1|5|A|219
7PIR|1|5|U|220
7PIR|1|5|U|221
7PIR|1|5|U|222
7PIR|1|5|G|223
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain O
- 30S ribosomal protein S16
- Chain S
- 30S ribosomal protein S20
Coloring options: