IL_7PIR_146
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- GAUAC*GUAUC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_146 not in the Motif Atlas
- Geometric match to IL_5TBW_121
- Geometric discrepancy: 0.395
- The information below is about IL_5TBW_121
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05145.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 13
Unit IDs
7PIR|1|5|G|819
7PIR|1|5|A|820
7PIR|1|5|U|821
7PIR|1|5|A|822
7PIR|1|5|C|823
*
7PIR|1|5|G|868
7PIR|1|5|U|869
7PIR|1|5|A|870
7PIR|1|5|U|871
7PIR|1|5|C|872
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S8
- Chain K
- 30S ribosomal protein S12
- Chain P
- 30S ribosomal protein S17
Coloring options: