IL_7PIR_196
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- UAGGG*UAGG
- Length
- 9 nucleotides
- Bulged bases
- 7PIR|1|5|G|662
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_196 not in the Motif Atlas
- Homologous match to IL_5J7L_033
- Geometric discrepancy: 0.3281
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7PIR|1|5|U|659
7PIR|1|5|A|660
7PIR|1|5|G|661
7PIR|1|5|G|662
7PIR|1|5|G|663
*
7PIR|1|5|U|737
7PIR|1|5|A|738
7PIR|1|5|G|739
7PIR|1|5|G|740
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S6
- Chain N
- 30S ribosomal protein S15
- Chain Q
- 30S ribosomal protein S18
- Chain T
- 30S ribosomal protein S21
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