IL_7PJZ_095

3D structure

PDB id

7PJZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

CUGAG*CGAGAUGAG

Length

14 nucleotides

Bulged bases

7PJZ|1|A|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PJZ_095 not in the Motif Atlas

Homologous match to IL_7RQB_102

Geometric discrepancy: 0.1346

The information below is about IL_7RQB_102

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.1

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

7PJZ|1|A|C|2636
7PJZ|1|A|U|2637
7PJZ|1|A|G|2638
7PJZ|1|A|A|2639
7PJZ|1|A|G|2640
*
7PJZ|1|A|C|2774
7PJZ|1|A|G|2775
7PJZ|1|A|A|2776
7PJZ|1|A|G|2777
7PJZ|1|A|A|2778
7PJZ|1|A|U|2779
7PJZ|1|A|G|2780
7PJZ|1|A|A|2781
7PJZ|1|A|G|2782

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13