IL_7PJZ_146
3D structure
- PDB id
- 7PJZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- GGAGUACGGC*GUUAAAAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PJZ_146 not in the Motif Atlas
- Geometric match to IL_6UFM_002
- Geometric discrepancy: 0.3361
- The information below is about IL_6UFM_002
- Detailed Annotation
- 10x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_43547.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PJZ|1|a|G|887
7PJZ|1|a|G|888
7PJZ|1|a|A|889
7PJZ|1|a|G|890
7PJZ|1|a|U|891
7PJZ|1|a|A|892
7PJZ|1|a|C|893
7PJZ|1|a|G|894
7PJZ|1|a|G|895
7PJZ|1|a|C|896
*
7PJZ|1|a|G|903
7PJZ|1|a|U|904
7PJZ|1|a|U|905
7PJZ|1|a|A|906
7PJZ|1|a|A|907
7PJZ|1|a|A|908
7PJZ|1|a|A|909
7PJZ|1|a|C|910
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S12
Coloring options: