IL_7PJZ_177
3D structure
- PDB id
- 7PJZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- GCUAAG*CGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 7PJZ|1|A|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PJZ_177 not in the Motif Atlas
- Geometric match to IL_7A0S_098
- Geometric discrepancy: 0.2549
- The information below is about IL_7A0S_098
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.8
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7PJZ|1|A|G|997
7PJZ|1|A|C|998
7PJZ|1|A|U|999
7PJZ|1|A|A|1000
7PJZ|1|A|A|1001
7PJZ|1|A|G|1002
*
7PJZ|1|A|C|1153
7PJZ|1|A|G|1154
7PJZ|1|A|A|1155
7PJZ|1|A|A|1156
7PJZ|1|A|G|1157
7PJZ|1|A|C|1158
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain Z
- 50S ribosomal protein L30
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