IL_7PKQ_021
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- AGGAU*AGAAUAUU
- Length
- 13 nucleotides
- Bulged bases
- 7PKQ|1|3|A|155
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PKQ_021 not in the Motif Atlas
- Homologous match to IL_5J7L_035
- Geometric discrepancy: 0.4445
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7PKQ|1|3|A|137
7PKQ|1|3|G|138
7PKQ|1|3|G|139
7PKQ|1|3|A|140
7PKQ|1|3|U|141
*
7PKQ|1|3|A|152
7PKQ|1|3|G|153
7PKQ|1|3|A|154
7PKQ|1|3|A|155
7PKQ|1|3|U|156
7PKQ|1|3|A|157
7PKQ|1|3|U|158
7PKQ|1|3|U|159
Current chains
- Chain 3
- S3 rRNA
Nearby chains
- Chain k
- uS11m
Coloring options: