IL_7PO2_002

3D structure

PDB id

7PO2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GUUG*CUUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PO2_002 not in the Motif Atlas

Geometric match to IL_2PN3_004

Geometric discrepancy: 0.153

The information below is about IL_2PN3_004

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7PO2|1|5|G|49
7PO2|1|5|U|50
7PO2|1|5|U|51
7PO2|1|5|G|52
*
7PO2|1|5|C|62
7PO2|1|5|U|63
7PO2|1|5|U|64
7PO2|1|5|C|65

Current chains

Chain 5

fMet-tRNAMet

Nearby chains