IL_7PWO_052
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGUAAC*GGAAAAG
- Length
- 13 nucleotides
- Bulged bases
- 7PWO|1|1|A|1562
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_052 not in the Motif Atlas
- Homologous match to IL_8C3A_084
- Geometric discrepancy: 0.0856
- The information below is about IL_8C3A_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.4
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
7PWO|1|1|C|1549
7PWO|1|1|G|1550
7PWO|1|1|U|1551
7PWO|1|1|A|1552
7PWO|1|1|A|1553
7PWO|1|1|C|1554
*
7PWO|1|1|G|1559
7PWO|1|1|G|1560
7PWO|1|1|A|1561
7PWO|1|1|A|1562
7PWO|1|1|A|1563
7PWO|1|1|A|1564
7PWO|1|1|G|1565
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain n1
- Ribosomal protein eL41
- Chain p2
- Ribosomal protein L37a
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