IL_7PWO_091
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GCCUGG*CCACCC
- Length
- 12 nucleotides
- Bulged bases
- 7PWO|1|1|C|2545
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_091 not in the Motif Atlas
- Geometric match to IL_5J7L_350
- Geometric discrepancy: 0.2429
- The information below is about IL_5J7L_350
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.8
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
7PWO|1|1|G|2517
7PWO|1|1|C|2518
7PWO|1|1|C|2519
7PWO|1|1|U|2520
7PWO|1|1|G|2521
7PWO|1|1|G|2522
*
7PWO|1|1|C|2542
7PWO|1|1|C|2543
7PWO|1|1|A|2544
7PWO|1|1|C|2545
7PWO|1|1|C|2546
7PWO|1|1|C|2547
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain H2
- Ribosomal protein L6
- Chain O2
- Ribosomal protein L13a
- Chain m2
- Ubiquitin/Ribosomal protein L40e
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