IL_7PWO_096
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- AGGG*CGUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_096 not in the Motif Atlas
- Geometric match to IL_4V9F_100
- Geometric discrepancy: 0.0986
- The information below is about IL_4V9F_100
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.3
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 47
Unit IDs
7PWO|1|1|A|2649
7PWO|1|1|G|2650
7PWO|1|1|G|2651
7PWO|1|1|G|2652
*
7PWO|1|1|C|2663
7PWO|1|1|G|2664
7PWO|1|1|U|2665
7PWO|1|1|U|2666
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain I1
- 40S ribosomal protein S8
- Chain R2
- Ribosomal protein L19
- Chain U2
- Ribosomal protein eL22
- Chain W2
- Ribosomal protein L24A
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