IL_7PWO_134
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGC*GCUCCGG
- Length
- 10 nucleotides
- Bulged bases
- 7PWO|1|2|C|838, 7PWO|1|2|C|840, 7PWO|1|2|G|842
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_134 not in the Motif Atlas
- Homologous match to IL_4V88_437
- Geometric discrepancy: 0.2037
- The information below is about IL_4V88_437
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62898.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7PWO|1|2|C|786
7PWO|1|2|G|787
7PWO|1|2|C|788
*
7PWO|1|2|G|837
7PWO|1|2|C|838
7PWO|1|2|U|839
7PWO|1|2|C|840
7PWO|1|2|C|841
7PWO|1|2|G|842
7PWO|1|2|G|843
Current chains
- Chain 2
- rRNA 18S
Nearby chains
- Chain C1
- Ribosomal protein S2
- Chain L1
- SSU ribosomal protein S17P
- Chain N1
- Ribosomal protein S13
- Chain W1
- Ribosomal protein S15A
- Chain X1
- Ribosomal protein S23
- Chain b1
- Ribosomal protein S27
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