IL_7PWO_156

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7PWO|1|2|C|1323, 7PWO|1|2|A|1419

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PWO_156 not in the Motif Atlas

Homologous match to IL_4V88_463

Geometric discrepancy: 0.1205

The information below is about IL_4V88_463

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7PWO|1|2|C|1322
7PWO|1|2|C|1323
7PWO|1|2|G|1324
*
7PWO|1|2|C|1417
7PWO|1|2|A|1418
7PWO|1|2|A|1419
7PWO|1|2|G|1420

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain a1

40S ribosomal protein S26