IL_7PWO_165
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_165 not in the Motif Atlas
- Homologous match to IL_4V88_471
- Geometric discrepancy: 0.204
- The information below is about IL_4V88_471
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
7PWO|1|2|C|1355
7PWO|1|2|G|1356
7PWO|1|2|A|1357
7PWO|1|2|G|1358
*
7PWO|1|2|C|1382
7PWO|1|2|G|1383
7PWO|1|2|A|1384
7PWO|1|2|G|1385
Current chains
- Chain 2
- rRNA 18S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain G1
- 40S ribosomal protein S6
- Chain I1
- 40S ribosomal protein S8
- Chain W2
- Ribosomal protein L24A
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