IL_7PZY_053
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- CUCAUCAG*CUCAAG
- Length
- 14 nucleotides
- Bulged bases
- 7PZY|1|1|U|1187, 7PZY|1|1|C|1188, 7PZY|1|1|C|1312, 7PZY|1|1|A|1314
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_053 not in the Motif Atlas
- Homologous match to IL_8C3A_054
- Geometric discrepancy: 0.0796
- The information below is about IL_8C3A_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_27086.1
- Basepair signature
- cWW-tWW-L-tWW-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7PZY|1|1|C|1183
7PZY|1|1|U|1184
7PZY|1|1|C|1185
7PZY|1|1|A|1186
7PZY|1|1|U|1187
7PZY|1|1|C|1188
7PZY|1|1|A|1189
7PZY|1|1|G|1190
*
7PZY|1|1|C|1310
7PZY|1|1|U|1311
7PZY|1|1|C|1312
7PZY|1|1|A|1313
7PZY|1|1|A|1314
7PZY|1|1|G|1315
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 0
- 60S ribosomal protein L20
- Chain AN
- Rpl40bp
- Chain q
- Ribosomal 60S subunit protein L9B
- Chain u
- Ribosomal 60S subunit protein L14B
- Chain w
- Ribosomal 60S subunit protein L16A
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