IL_7PZY_071
3D structure
- PDB id
- 7PZY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the vacant Candida albicans 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- UGAAU*AGGAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PZY_071 not in the Motif Atlas
- Geometric match to IL_5TBW_067
- Geometric discrepancy: 0.1467
- The information below is about IL_5TBW_067
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
7PZY|1|1|U|1641
7PZY|1|1|G|1642
7PZY|1|1|A|1643
7PZY|1|1|A|1644
7PZY|1|1|U|1645
*
7PZY|1|1|A|1802
7PZY|1|1|G|1803
7PZY|1|1|G|1804
7PZY|1|1|A|1805
7PZY|1|1|A|1806
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AA
- 60S ribosomal protein L27
- Chain AH
- Ribosomal 60S subunit protein L34B
- Chain j
- Ribosomal 60S subunit protein L2A
Coloring options: