IL_7Q08_044
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- UCUUG*UAA
- Length
- 8 nucleotides
- Bulged bases
- 7Q08|1|1|U|1012, 7Q08|1|1|U|1013
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q08_044 not in the Motif Atlas
- Geometric match to IL_3KTW_002
- Geometric discrepancy: 0.266
- The information below is about IL_3KTW_002
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_43275.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 30
Unit IDs
7Q08|1|1|U|1010
7Q08|1|1|C|1011
7Q08|1|1|U|1012
7Q08|1|1|U|1013
7Q08|1|1|G|1014
*
7Q08|1|1|U|1030
7Q08|1|1|A|1031
7Q08|1|1|A|1032
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain i
- HABP4_PAI-RBP1 domain-containing protein
- Chain m
- Ribosomal 60S subunit protein L5
- Chain r
- Ribosomal 60S subunit protein L10
- Chain s
- Ribosomal 60S subunit protein L11B
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