IL_7Q08_070

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

7Q08|1|1|U|1625

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_070 not in the Motif Atlas

Geometric match to IL_5TBW_066

Geometric discrepancy: 0.1417

The information below is about IL_5TBW_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48431.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

7Q08|1|1|U|1623
7Q08|1|1|C|1624
7Q08|1|1|U|1625
7Q08|1|1|U|1626
7Q08|1|1|C|1627
*
7Q08|1|1|G|1807
7Q08|1|1|G|1808
7Q08|1|1|A|1809
7Q08|1|1|A|1810
7Q08|1|1|U|1811
7Q08|1|1|A|1812

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AA

60S ribosomal protein L27