IL_7Q08_099

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GCGG*UAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_099 not in the Motif Atlas

Homologous match to IL_8C3A_096

Geometric discrepancy: 0.0691

The information below is about IL_8C3A_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_63450.5

Basepair signature

cWW-cHS-cWW-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7Q08|1|1|G|2369
7Q08|1|1|C|2370
7Q08|1|1|G|2371
7Q08|1|1|G|2372
*
7Q08|1|1|U|2958
7Q08|1|1|A|2959
7Q08|1|1|C|2960

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain k

Ribosomal 60S subunit protein L3

Chain w

Ribosomal 60S subunit protein L16A

Chain x

Ribosomal 60S subunit protein L17B