IL_7Q08_132

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CUUA*UUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7Q08_132 not in the Motif Atlas

Homologous match to IL_8C3A_134

Geometric discrepancy: 0.0649

The information below is about IL_8C3A_134

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_67085.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

55

Unit IDs

7Q08|1|1|C|3200
7Q08|1|1|U|3201
7Q08|1|1|U|3202
7Q08|1|1|A|3203
*
7Q08|1|1|U|3214
7Q08|1|1|U|3215
7Q08|1|1|U|3216
7Q08|1|1|G|3217

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain w

Ribosomal 60S subunit protein L16A